Comparison between ChromStruct4 and TADbit

Caudai C., Salerno E., Zoppé M., Tonazzini A.

Cromosome conformation capture  Topologically associating domains  Contact matrices 

In this report performances of ChromStruct4 and tadbit have been compared. These are two methods for the inference of chromatin three-dimensional conformations starting from Chromosome Conforma- tion Capture data. tadbit and ChromStruct4 have been tested against the same data sets from real hi-c experiments. With comparative experi- ments, also robustness of ChromStruct4 against biases have been tested.

Source: ISTI Technical reports, 2017